#CommonWL

Open Bioinformatics FoundationOpenBio@genomic.social
2025-07-21

Thank you to @biocrusoe for the touching tribute to Peter Amstutz @tetron in the #BOSC2025 opening session - a very fitting venue as much of his work was with #CommonWL, which involved many of our community, and started at the #CoFest: floss.social/@cwl/114655254702

Peter Amstutztetron@hachyderm.io
2025-01-13

A little preview of this incredible project I've been working on with @wait_sasha
End to end preclinical #ai for #genomics using a #MiniPC, external #gpu, #arvados and a #commonwl #workflow to ask #llama 3.3 70B to help you understand your genome!

youtube.com/shorts/aeNOBV-ZVaw

2024-10-02

Next Month 11/13

83th Workflow Meetup
2024/11/13(Wed) 13:00 - 19:00 (JST)
Virtual Meetup (online)
第83回ワークフローミートアップ
開催お知らせ
今回は、完全オンラインで開催予定

github.com/workflow-meetup-jp/

Common Workflow Languagecwl@floss.social
2024-08-27

#CommonWL community members are participating in this week's DBCLS sponsored BioHackathon! #biohackjp

Some progress reports:

Common Workflow Languagecwl@floss.social
2024-05-15

#CommonWL Conference Sessions 3 & 4 are successfully finished!

Thanks to our invited keynote speaker Ewe Deelman and all of our presenters and participants!

Screenshot of a Jitsi video conference embedded in an Element/Matrix chat labeled "CWL Conference". Many of the participants have their cameras turned on and their arms in the air, in celebration. One of the cameras shows an auditorium at VU Amsterdam where 17 people (all wearing FFP3 facemasks) are also celebrating with their arms in the air.Invited keynote speaker, Ewa Deelman, stands behind a podium. Over her left shoulder is a large screen with the title slide labeled "The Pegasus Workflow Management System: Current Applications and Future Directions". The slide lists Dr. Deelman's affiliation: University of Southern California, School of Engineering; Information Sciences Institute. deelman@isi.edu
Her work is funded by NSF awards #2018074 and #1664162
Common Workflow Languagecwl@floss.social
2024-05-09

Session 2 of the CWL Conference 2024 starts in an hour!

Program: commonwl.org/conferences/2024/

You can still sign up for free; we give you the connection information automatically: forms.gle/1q2q7t5vVVjUhGKR7

Can't attend Session 2, or did you miss Session 1? No worries, the videos are already online and linked from the program. Click through and you can also leave questions and comments for the presenters.

#CommonWL #SciWorkflows

Common Workflow Languagecommonwl@conf.tube
2024-05-09
Common Workflow Languagecommonwl@conf.tube
2024-05-09

Salad Goes Rusty: Expanding the Horizons of CWL

conf.tube/videos/watch/7c4f152

Common Workflow Languagecommonwl@conf.tube
2024-05-08

Challenges and Requirements to Drive Workflows from the Data Plane

conf.tube/videos/watch/a48424c

Common Workflow Languagecommonwl@conf.tube
2024-05-08

Advancing Workflow Automation: Insights from Workflow Execution Service and the Common Workflow Language

conf.tube/videos/watch/ed7bab3

Common Workflow Languagecommonwl@conf.tube
2024-05-06

JSON Schemas for validating CWL and CWL Inputs

conf.tube/videos/watch/1ae180a

Common Workflow Languagecommonwl@conf.tube
2024-05-06

Integrating Scientific Workflows into Services and Applications using CWL

conf.tube/videos/watch/ca3c2f6

Common Workflow Languagecommonwl@conf.tube
2024-05-05

NGS360 - A NGS Data Management and Analysis Platform

conf.tube/videos/watch/600af8c

Common Workflow Languagecommonwl@conf.tube
2024-05-05

SWEL: A domain-specific language for modelling data-intensive workflows

conf.tube/videos/watch/6c8a143

Common Workflow Languagecommonwl@conf.tube
2024-05-05

Performance Evaluation of GPU-intensive Genome Analysis Workflows in HPC and Cloud

conf.tube/videos/watch/9b0dbf2

Common Workflow Languagecommonwl@conf.tube
2024-05-05

Towards Automating Federated Learning Operations at Scale Leveraging CWL

conf.tube/videos/watch/c9867ad

Common Workflow Languagecommonwl@conf.tube
2024-05-05

Renku: a platform for sustainable data science

conf.tube/videos/watch/4c95230

Common Workflow Languagecommonwl@conf.tube
2024-05-05

CWL-Enabled Reusable and Reproducible Genomic Data Management and Analysis in R

conf.tube/videos/watch/093fc67

Common Workflow Languagecommonwl@conf.tube
2024-05-05

Extending CWL for High-Performance Computing: A Visual Workflow System with HPC Enhancements

conf.tube/videos/watch/d089da4

Client Info

Server: https://mastodon.social
Version: 2025.07
Repository: https://github.com/cyevgeniy/lmst