Big news! Our week-long #bioimageanalysis bootcamp is BACK! Learn how to think about bioimage analysis like the pros do, learn what corrections you should (and shouldn't!) apply to your images, learn open source tools, and more. Apply NOW at broad.io/BAB3 for our January 2026 course!

#bioimageanalysis wouldn't be the same without all the great RSEs who make our tools and keep them working! Great paper on this from a couple of years ago linked below - if there's a tool that makes your life easier, think about taking a few minutes today to thank the person or people who make it!

RE: https://bsky.app/profile/did:plc:okkgjibnf4hzx2b7k2avhznm/post/3m2qli6skfb2x

Frontiers | Better research so...

✍ If you're having difficulty writing #BioimageAnalysis code that enables others to follow your workflow, have a look at the slides from @nfdi4bioimage Task Area Leader @haesleinhuepf on „Reproducible Bio-Image Analysis using Python, Napari, Jupyter and AI“ from the #EMBOlsm25.

Find the slides for the session here: 👉 https://doi.org/10.5281/zenodo.16793738

If you would like to attend a microscopy or bioimage analysis training course in the next 6 months but don’t have funding, check out our Microscopy Training Grant from @J_Cell_Sci and @focalplane_jcs.

Next deadline: 6 June 2025

https://www.biologists.com/grants/jcs-focalplane-training-grants/

#Microscopy #BioimageAnalysis #Bioimage #Biology #Training #Grants

BIG NEWS - for the first time ever, we're running a Bioimage Analysis Beginnings Bootcamp. Learn #bioimageanalysis from awesome folks, and gain familiarity with some new tools as well as how to pick the right tool in the first place. Aug 4th-8th - apply here (soon!) forms.gle/d2fCXsrWHVP8...

If you train people in ImageJ, Fiji, whatever, even if it isn't your day job, please let us know, and please share this post! Thanks a ton, we really appreciate it. (2/2) forms.gle/C8dUpg8qZkbD... #bioimaging #microscopy #bioimageanalysis

Open Source Bioimage Analysis ...

Bioimaging and bioimage analysis friends, some help if you have 2-3 mins; for a paper, we're trying to estimate the number of biologists trained in open source software or tools in the last ~5 years. (1/2) #bioimaging #microscopy #bioimageanalysis

Delighted to announce that @erinweisbart.bsky.social and I have teamed up to create a new bioimage analysis video podcast called Ask Erin/Dear Beth - you can check it out at the link below! It will highlight common challenges in #bioimageanalysis, as well as our favorite solutions to them. (1/x)

Ask Erin, Dear Beth

If, hypothetically, a person were trying to set up a career panel series for bioimage analysis, what kinds of roles (or specific people) would you want to hear more about? Hypothetical nominations of all stripes welcome :) #bioimageanalysis

@NadiaHalidi

Workshop on True Image Deconvolution, Restoration, and Analysis

When: March 13th, 2025 – 3 days from now.

2 hours long: 14:30 - 16:30 CET

Where: online, via zoom.

Program: https://www.crg.eu/en/event/workshop-true-image-deconvolution-restoration-and-analysis

Registration: https://apps.crg.es/content/internet/events/webforms/workshop-true-image-deconvolution-restoration-and-analysis

#BioimageAnalysis #PSF #deconvolution #ImageProcessing #microscopy

We're once again hiring a summer (+?) #bioimage #bioimageanalysis #software intern! Due to requirements of the funding program, you must be a current student, as well as work onsite in MA (+ have US work permission). Details at the link below. Spend your summer making great tools with fun people!

Software engineering intern - ...

Job - Alert 🧬

🎓 MASTERS INTERN (M/F/D): MACHINE LEARNING AND BIOIMAGE ANALYSIS

Deadline: 2025-03-31
Location: Germany, Dortmund, Nordrhein Westfalen

https://www.academiceurope.com/job/?id=7080

#hiring #MastersInternship #BioimageAnalysis #computerscience #statistics #BiomedicalSciences #Mathematics

Is your current biological image analysis producing inaccurate results? Apply for #EMBOBioImage and fix that! 🔬✨ Learn theoretical advancements and the practical skills to apply them.

📩 Apply by 4 June
🗓️ 14 – 19 September
📍 EMBL Heidelberg and Virtual
➡️ https://s.embl.org/bia25-01-ma

#EMBLEvents #bioimageanalysis #spatialstatistics #artificialintelligence #computervision #microscopydata

Our #preprint list is now up on FocalPlane. This week we focus on research in #bioimageanalysis. Drop us a message if we’re missing any preprints that you’ve been reading or writing!
https://focalplane.biologists.com/2024/11/29/microscopy-preprints-bioimage-analysis-7/

If you would like to attend a #microscopy or #bioimageanalysis training course in the next ~6 months but don’t have funding, check out our JCS-FocalPlane training grants to see if you are eligible.

Next deadline: 22 November 2024

https://www.biologists.com/grants/jcs-focalplane-training-grants/

Nice shout-out to #opensource #microscopy and #imageanalysis #bioimageanalysis software at #CZIImaging #ImagingTheFuture.

Need a 5-15 minute break from doomscrolling? (You know you do!) Take 5 minutes and tell us how to make #bioimageanalysis #imageanalysis better!

RE: https://bsky.app/profile/did:plc:o7tynxmyxsuhoeknkm7r2dul/post/3l6z5bxyc7o25

Virtual I2K starts TOMORROW, Monday the 28th! 34 FREE sessions, 900+ registrants so far. Learn more about favorite #bioimageanalysis tools or find your next favorite! i2kconference.org/virtual Please also help our community improve by filling out our survey - forum.image.sc/t/2024-image...

Have you ever analyzed a #microscope image before- even just a single one? Please take our survey on progress and places to still improve for image analysis software! #microscopy #imageanalysis #bioimageanalysis forum.image.sc/t/2024-image...

2024 Image Analysis Survey

#preprint alert 🚨
Can Large Language Models solve common #BioImageAnalysis coding tasks? And which #LLM performs best? 🙃🤓
Great collaboration with Christian Tischer, Jean-Karim Hériché and Nico Scherf
🔬🖥️🅰️ℹ️🤝🚀
https://www.biorxiv.org/content/10.1101/2024.04.19.590278v3