Common Workflow Language

Official Common Workflow Language #CommonWL account.
Posts by @biocrusoe@octodon.social

Common Workflow Language boosted:
Sovereign Tech Agencysovtechfund
2026-02-13

The Sovereign Tech Agency is exploring how to better support open source maintainers and contributors who are actively working on technology standards relevant to their open source infrastructure projects.

Open standards are foundational to a healthy open source ecosystem. They enable interoperability, enhance digital sovereignty, foster competition and innovation and ensure that critical digital infrastructure remains accessible and serves the public interest.

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Informational visual in Sovereign Tech Agency design, headline: "Share Your Perspective" sub-headline: "on Open Standards" underneath a stock image in black and white, with words on a banner saying "We Hear you."
Common Workflow Languagecwl@floss.social
2025-06-09

We are very sad to share that on Saturday, June 7th, one of the CWL co-founders, Peter Amstutz @tetron passed away.

obits.concordfuneral.com/peter

> Family and friends will gather to honor and remember Peter on Friday, June 13, 2025 at 11:00 a.m. at the Concord Funeral Home, 74 Belknap Street, Concord, MA. Visitation and burial will be private.

> Donations in his memory may be made to @eff

Common Workflow Languagecwl@floss.social
2024-08-27

@tm_tn. also released a new version of shaft (github.com/tom-tan/shaft/relea), an executor for CWL, to demonstrate new feature of CWL conformance test suite

Now users see the detailed results of each test category
Example: detailed result of the `CommandLineTool` category github.com/tom-tan/conformance

Other CWL engines can easily implement the same feature with custom GitHub Actions in the marketplace
Run CWL conformance tests: github.com/marketplace/actions
Upload CWL conformance badges: github.com/marketplace/actions

Common Workflow Languagecwl@floss.social
2024-08-27

@tm_tn reported an issue to clarify a corner case in the spec of CWL v1.3: github.com/common-workflow-lan

Common Workflow Languagecwl@floss.social
2024-08-27

#CommonWL community members are participating in this week's DBCLS sponsored BioHackathon! #biohackjp

Some progress reports:

Common Workflow Language boosted:
Common Workflow Languagecommonwl@conf.tube
2024-05-16

LivePublication: Integrating live, distributed computational workflows with programmatic articles

conf.tube/videos/watch/62c0bab

Common Workflow Language boosted:
Common Workflow Languagecommonwl@conf.tube
2024-05-16

Integrating Scientific Workflows into Services and Applications using CWL

conf.tube/videos/watch/ca3c2f6

Common Workflow Language boosted:
Common Workflow Languagecommonwl@conf.tube
2024-05-16
Common Workflow Languagecwl@floss.social
2024-05-15

You can watch the prepared recordings of the talks at cwl.discourse.group/c/cwlcon-2 ; we recorded the keynote and some of the Q&A sessions and will be posting those later.

Common Workflow Languagecwl@floss.social
2024-05-15

#CommonWL Conference Sessions 3 & 4 are successfully finished!

Thanks to our invited keynote speaker Ewe Deelman and all of our presenters and participants!

Screenshot of a Jitsi video conference embedded in an Element/Matrix chat labeled "CWL Conference". Many of the participants have their cameras turned on and their arms in the air, in celebration. One of the cameras shows an auditorium at VU Amsterdam where 17 people (all wearing FFP3 facemasks) are also celebrating with their arms in the air.Invited keynote speaker, Ewa Deelman, stands behind a podium. Over her left shoulder is a large screen with the title slide labeled "The Pegasus Workflow Management System: Current Applications and Future Directions". The slide lists Dr. Deelman's affiliation: University of Southern California, School of Engineering; Information Sciences Institute. deelman@isi.edu
Her work is funded by NSF awards #2018074 and #1664162
Common Workflow Language boosted:
Common Workflow Languagecommonwl@conf.tube
2024-05-15

Performance Evaluation of GPU-intensive Genome Analysis Workflows in HPC and Cloud

conf.tube/videos/watch/9b0dbf2

Common Workflow Language boosted:
Common Workflow Languagecommonwl@conf.tube
2024-05-15

Challenges and Requirements to Drive Workflows from the Data Plane

conf.tube/videos/watch/a48424c

Common Workflow Language boosted:
Common Workflow Languagecommonwl@conf.tube
2024-05-15

Towards Enhancing WaaS and Data Provenance over Reana: Enhancing Reproducibility on the European AI-on-Demand Platform

conf.tube/videos/watch/0e5b44e

Common Workflow Language boosted:
Common Workflow Languagecommonwl@conf.tube
2024-05-15

Various tips for over thousand of jobs at HPC environment

conf.tube/videos/watch/a865e29

Common Workflow Language boosted:
Common Workflow Languagecommonwl@conf.tube
2024-05-15

Extending CWL for High-Performance Computing: A Visual Workflow System with HPC Enhancements

conf.tube/videos/watch/d089da4

Common Workflow Language boosted:
Common Workflow Languagecommonwl@conf.tube
2024-05-15

CWL-Enabled Reusable and Reproducible Genomic Data Management and Analysis in R

conf.tube/videos/watch/093fc67

Common Workflow Language boosted:
Common Workflow Languagecommonwl@conf.tube
2024-05-15

NGS360 - A NGS Data Management and Analysis Platform

conf.tube/videos/watch/600af8c

Common Workflow Language boosted:
Common Workflow Languagecommonwl@conf.tube
2024-05-15

JSON Schemas for validating CWL and CWL Inputs

conf.tube/videos/watch/1ae180a

Common Workflow Language boosted:
Common Workflow Languagecommonwl@conf.tube
2024-05-15

Advancing Workflow Automation: Insights from Workflow Execution Service and the Common Workflow Language

conf.tube/videos/watch/ed7bab3

Common Workflow Language boosted:
Common Workflow Languagecommonwl@conf.tube
2024-05-15

Salad Goes Rusty: Expanding the Horizons of CWL

conf.tube/videos/watch/7c4f152

Client Info

Server: https://mastodon.social
Version: 2025.07
Repository: https://github.com/cyevgeniy/lmst